Site Map

General features:

• Any accessed protein or cluster is listed on the history frame (on the right) and can be accessed at any point. ["History box"]
• Detailed explanation is attached to most of the terms used and can be accessed by clicking the term without interrupting the current work. ["Help window"]

• Certain features are available only in advanced mode

Contents:

Navigation tools:

Individual protein:

Get protein card

Protein Sequence Alignment (BLAST)

Vertical perspective:

Get cluster card

• General info, Browse cluster in tree
• Keywords Appearances
• PANDORA
• Proteins of cluster
• Taxonomy of cluster
• Link to Cluster Distance Distributions

Horizontal perspective:

View ProtoNet at specific ProtoLevel (advanced mode only)

Analyzing ProtoNet:

Get clusters having proteins with keywords

Check protein in cluster

Get the lowest common cluster of two proteins

Cluster Distance Distributions (advanced mode only)

Other Utilities:

History box

Help window

Classify your protein